Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 LILRP1-201ENST00000444199 1370 ntBASIC13.56□□□□□ -0.24
VBP1P61758 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VBP1P61758 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.56□□□□□ -0.24
VBP1P61758 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
VBP1P61758 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.55□□□□□ -0.24
VBP1P61758 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 AZGP1P1-201ENST00000411909 902 ntBASIC13.55□□□□□ -0.24
VBP1P61758 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.55□□□□□ -0.24
VBP1P61758 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.55□□□□□ -0.24
VBP1P61758 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.55□□□□□ -0.24
VBP1P61758 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 OR7E14P-202ENST00000530490 1290 ntBASIC13.55□□□□□ -0.24
VBP1P61758 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.55□□□□□ -0.24
VBP1P61758 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
VBP1P61758 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VBP1P61758 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
VBP1P61758 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.54□□□□□ -0.24
VBP1P61758 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 FOXO1B-201ENST00000504678 1527 ntBASIC13.54□□□□□ -0.24
VBP1P61758 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.54□□□□□ -0.24
VBP1P61758 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VBP1P61758 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
VBP1P61758 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VBP1P61758 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.54□□□□□ -0.24
VBP1P61758 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.54□□□□□ -0.24
VBP1P61758 RPS2P1-201ENST00000434010 821 ntBASIC13.54□□□□□ -0.24
VBP1P61758 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VBP1P61758 AL139010.1-201ENST00000454878 894 ntBASIC13.54□□□□□ -0.24
VBP1P61758 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms