Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERFP50548 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ERFP50548 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.07
ERFP50548 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
ERFP50548 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.64□□□□□ -0.07
ERFP50548 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.64□□□□□ -0.07
ERFP50548 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.64□□□□□ -0.07
ERFP50548 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.64□□□□□ -0.07
ERFP50548 AC098831.1-202ENST00000438821 336 ntBASIC14.64□□□□□ -0.07
ERFP50548 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.64□□□□□ -0.07
ERFP50548 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.64□□□□□ -0.07
ERFP50548 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 RNA5SP410-201ENST00000516285 106 ntBASIC14.64□□□□□ -0.07
ERFP50548 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.64□□□□□ -0.07
ERFP50548 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.64□□□□□ -0.07
ERFP50548 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.64□□□□□ -0.07
ERFP50548 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.64□□□□□ -0.07
ERFP50548 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
ERFP50548 AC024267.1-201ENST00000582320 895 ntBASIC14.64□□□□□ -0.07
ERFP50548 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.64□□□□□ -0.07
ERFP50548 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ERFP50548 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.64□□□□□ -0.07
ERFP50548 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
ERFP50548 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.64□□□□□ -0.07
ERFP50548 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERFP50548 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.64□□□□□ -0.07
ERFP50548 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ERFP50548 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.63□□□□□ -0.07
ERFP50548 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ERFP50548 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
ERFP50548 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
ERFP50548 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.63□□□□□ -0.07
ERFP50548 AZGP1P1-201ENST00000411909 902 ntBASIC14.63□□□□□ -0.07
ERFP50548 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.63□□□□□ -0.07
ERFP50548 AC098859.1-201ENST00000502915 1238 ntBASIC14.63□□□□□ -0.07
ERFP50548 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.63□□□□□ -0.07
ERFP50548 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.63□□□□□ -0.07
ERFP50548 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.63□□□□□ -0.07
ERFP50548 AL662844.1-201ENST00000546340 181 ntBASIC14.63□□□□□ -0.07
ERFP50548 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.63□□□□□ -0.07
ERFP50548 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.63□□□□□ -0.07
ERFP50548 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.63□□□□□ -0.07
ERFP50548 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.63□□□□□ -0.07
ERFP50548 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.63□□□□□ -0.07
ERFP50548 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ERFP50548 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERFP50548 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
ERFP50548 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms