Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.52■□□□□ 0.24
CENPFP49454 HLA-DPA2-205ENST00000433582 733 ntBASIC16.52■□□□□ 0.24
CENPFP49454 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.52■□□□□ 0.24
CENPFP49454 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.52■□□□□ 0.24
CENPFP49454 AC002044.2-201ENST00000624910 970 ntBASIC16.52■□□□□ 0.24
CENPFP49454 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.52■□□□□ 0.24
CENPFP49454 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.52■□□□□ 0.24
CENPFP49454 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CENPFP49454 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.52■□□□□ 0.24
CENPFP49454 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CENPFP49454 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CENPFP49454 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.52■□□□□ 0.23
CENPFP49454 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
CENPFP49454 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPFP49454 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
CENPFP49454 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CENPFP49454 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPFP49454 GEMIN8P4-201ENST00000380526 729 ntBASIC16.52■□□□□ 0.23
CENPFP49454 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.52■□□□□ 0.23
CENPFP49454 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.52■□□□□ 0.23
CENPFP49454 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.52■□□□□ 0.23
CENPFP49454 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.52■□□□□ 0.23
CENPFP49454 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPFP49454 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPFP49454 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
CENPFP49454 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
CENPFP49454 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CENPFP49454 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CENPFP49454 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CENPFP49454 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.51■□□□□ 0.23
CENPFP49454 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.51■□□□□ 0.23
CENPFP49454 AC006483.2-201ENST00000609813 515 ntBASIC16.51■□□□□ 0.23
CENPFP49454 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CENPFP49454 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.51■□□□□ 0.23
CENPFP49454 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.51■□□□□ 0.23
CENPFP49454 AC008536.3-201ENST00000623282 1599 ntBASIC16.51■□□□□ 0.23
CENPFP49454 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.51■□□□□ 0.23
CENPFP49454 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.51■□□□□ 0.23
CENPFP49454 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CENPFP49454 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CENPFP49454 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CENPFP49454 KRT18P46-201ENST00000435568 1279 ntBASIC16.51■□□□□ 0.23
CENPFP49454 RPL35P9-201ENST00000446059 350 ntBASIC16.51■□□□□ 0.23
CENPFP49454 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.51■□□□□ 0.23
CENPFP49454 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.51■□□□□ 0.23
CENPFP49454 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CENPFP49454 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.51■□□□□ 0.23
CENPFP49454 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.51■□□□□ 0.23
CENPFP49454 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 AC114947.1-202ENST00000514136 344 ntBASIC16.51■□□□□ 0.23
CENPFP49454 AC018846.1-201ENST00000568231 183 ntBASIC16.51■□□□□ 0.23
CENPFP49454 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CENPFP49454 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CENPFP49454 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.5■□□□□ 0.23
CENPFP49454 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.5■□□□□ 0.23
CENPFP49454 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.5■□□□□ 0.23
CENPFP49454 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 AC008825.2-201ENST00000603374 718 ntBASIC16.5■□□□□ 0.23
CENPFP49454 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.5■□□□□ 0.23
CENPFP49454 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.5■□□□□ 0.23
CENPFP49454 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.5■□□□□ 0.23
CENPFP49454 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.5■□□□□ 0.23
CENPFP49454 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.5■□□□□ 0.23
CENPFP49454 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.5■□□□□ 0.23
CENPFP49454 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.5■□□□□ 0.23
CENPFP49454 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CENPFP49454 AC108734.2-201ENST00000420887 1069 ntBASIC16.5■□□□□ 0.23
CENPFP49454 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.5■□□□□ 0.23
CENPFP49454 GOLGA2P7-209ENST00000560408 745 ntBASIC16.5■□□□□ 0.23
CENPFP49454 HERC2P11-201ENST00000562845 725 ntBASIC16.5■□□□□ 0.23
CENPFP49454 AC100756.2-201ENST00000569537 736 ntBASIC16.5■□□□□ 0.23
CENPFP49454 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms