Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RFC5P40937 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC5P40937 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC5P40937 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC5P40937 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFC5P40937 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RFC5P40937 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC5P40937 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RFC5P40937 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.59■□□□□ 0.25
RFC5P40937 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.59■□□□□ 0.25
RFC5P40937 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC5P40937 HIST2H2BB-201ENST00000449108 381 ntBASIC16.59■□□□□ 0.25
RFC5P40937 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC5P40937 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.59■□□□□ 0.25
RFC5P40937 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC5P40937 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.59■□□□□ 0.25
RFC5P40937 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC5P40937 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.59■□□□□ 0.25
RFC5P40937 MIR6869-201ENST00000619434 62 ntBASIC16.59■□□□□ 0.25
RFC5P40937 AC002472.3-201ENST00000640124 621 ntBASIC16.59■□□□□ 0.25
RFC5P40937 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.59■□□□□ 0.25
RFC5P40937 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.59■□□□□ 0.25
RFC5P40937 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.59■□□□□ 0.25
RFC5P40937 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFC5P40937 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFC5P40937 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RFC5P40937 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RFC5P40937 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RFC5P40937 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RFC5P40937 INE2-201ENST00000630399 1874 ntBASIC16.59■□□□□ 0.25
RFC5P40937 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC5P40937 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC5P40937 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RFC5P40937 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC5P40937 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.58■□□□□ 0.25
RFC5P40937 AC091951.1-201ENST00000512854 2465 ntBASIC16.58■□□□□ 0.25
RFC5P40937 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC5P40937 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RFC5P40937 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC5P40937 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RFC5P40937 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC5P40937 MIR4683-201ENST00000579659 81 ntBASIC16.58■□□□□ 0.24
RFC5P40937 MIR4538-201ENST00000581377 78 ntBASIC16.58■□□□□ 0.24
RFC5P40937 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC5P40937 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC5P40937 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC5P40937 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC5P40937 SALL4P5-201ENST00000419001 1760 ntBASIC16.58■□□□□ 0.24
RFC5P40937 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 AGAP7P-201ENST00000582299 2062 ntBASIC16.58■□□□□ 0.24
RFC5P40937 AGAP14-201ENST00000624701 2060 ntBASIC16.58■□□□□ 0.24
RFC5P40937 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RFC5P40937 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC5P40937 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RFC5P40937 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.58■□□□□ 0.24
RFC5P40937 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC5P40937 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RFC5P40937 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFC5P40937 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RFC5P40937 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RFC5P40937 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.57■□□□□ 0.24
RFC5P40937 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC5P40937 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.57■□□□□ 0.24
RFC5P40937 HSPB1P2-201ENST00000448722 546 ntBASIC16.57■□□□□ 0.24
RFC5P40937 AL591846.1-201ENST00000451736 433 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms