Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 FKBP4P6-201ENST00000457486 1332 ntBASIC14.96□□□□□ -0.01
HMGCLP35914 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HMGCLP35914 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HMGCLP35914 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGCLP35914 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.96□□□□□ -0.01
HMGCLP35914 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 ACA64.2-201ENST00000459014 129 ntBASIC14.96□□□□□ -0.01
HMGCLP35914 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGCLP35914 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HMGCLP35914 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGCLP35914 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.96□□□□□ -0.01
HMGCLP35914 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.96□□□□□ -0.01
HMGCLP35914 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 AC106820.3-201ENST00000561653 397 ntBASIC14.96□□□□□ -0.01
HMGCLP35914 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGCLP35914 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGCLP35914 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.96□□□□□ -0.02
HMGCLP35914 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
HMGCLP35914 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.96□□□□□ -0.02
HMGCLP35914 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.96□□□□□ -0.02
HMGCLP35914 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.96□□□□□ -0.02
HMGCLP35914 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.96□□□□□ -0.02
HMGCLP35914 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGCLP35914 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HMGCLP35914 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
HMGCLP35914 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.96□□□□□ -0.02
HMGCLP35914 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 INE2-201ENST00000630399 1874 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGCLP35914 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGCLP35914 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGCLP35914 FAM8A4P-201ENST00000435433 1213 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 KLF2P4-201ENST00000451959 1225 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 CTBP2P5-201ENST00000454986 1264 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 GPR53P-205ENST00000457298 1084 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.95□□□□□ -0.02
HMGCLP35914 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGCLP35914 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGCLP35914 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGCLP35914 AC131206.1-201ENST00000538078 1211 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 AC079316.1-201ENST00000548397 411 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGCLP35914 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGCLP35914 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGCLP35914 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 AC239800.4-201ENST00000603712 296 ntBASIC14.95□□□□□ -0.02
HMGCLP35914 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGCLP35914 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGCLP35914 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms