Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN3P26045 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PTPN3P26045 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.36■□□□□ 0.05
PTPN3P26045 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PTPN3P26045 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
PTPN3P26045 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN3P26045 AP001267.2-201ENST00000532619 2086 ntBASIC15.36■□□□□ 0.05
PTPN3P26045 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN3P26045 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 AC097359.2-201ENST00000604992 2389 ntBASIC15.35■□□□□ 0.05
PTPN3P26045 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
PTPN3P26045 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PTPN3P26045 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 ACTG1P3-201ENST00000431775 1114 ntBASIC15.35■□□□□ 0.05
PTPN3P26045 AC012441.1-201ENST00000446669 685 ntBASIC15.35■□□□□ 0.05
PTPN3P26045 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN3P26045 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 AC010319.3-201ENST00000597028 470 ntBASIC15.35■□□□□ 0.05
PTPN3P26045 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN3P26045 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN3P26045 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 AC025048.6-201ENST00000634326 1161 ntBASIC15.35■□□□□ 0.05
PTPN3P26045 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN3P26045 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PTPN3P26045 AC026748.1-201ENST00000624349 3251 ntBASIC15.35■□□□□ 0.05
PTPN3P26045 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PTPN3P26045 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN3P26045 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN3P26045 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PTPN3P26045 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN3P26045 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
PTPN3P26045 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN3P26045 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
PTPN3P26045 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.34■□□□□ 0.05
PTPN3P26045 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PTPN3P26045 BAATP1-201ENST00000412284 1225 ntBASIC15.34■□□□□ 0.05
PTPN3P26045 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.34■□□□□ 0.05
PTPN3P26045 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN3P26045 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.34■□□□□ 0.05
PTPN3P26045 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN3P26045 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.34■□□□□ 0.05
PTPN3P26045 AC134312.5-201ENST00000568031 1313 ntBASIC15.34■□□□□ 0.05
PTPN3P26045 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PTPN3P26045 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN3P26045 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PTPN3P26045 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
PTPN3P26045 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms