Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.05□□□□□ -0.16
TNFRSF1BP20333 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 TREML5P-201ENST00000421694 576 ntBASIC14.05□□□□□ -0.16
TNFRSF1BP20333 HLA-K-203ENST00000430151 1046 ntBASIC14.05□□□□□ -0.16
TNFRSF1BP20333 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.05□□□□□ -0.16
TNFRSF1BP20333 AC004066.1-201ENST00000502488 802 ntBASIC14.05□□□□□ -0.16
TNFRSF1BP20333 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 SPDYE18-201ENST00000510091 1050 ntBASIC14.05□□□□□ -0.16
TNFRSF1BP20333 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 AC087499.5-201ENST00000452760 1342 ntBASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TNFRSF1BP20333 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.04□□□□□ -0.16
TNFRSF1BP20333 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 TIMM17BP1-201ENST00000545713 516 ntBASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AC018665.1-201ENST00000622927 1362 ntBASIC14.04□□□□□ -0.16
TNFRSF1BP20333 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFRSF1BP20333 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms