Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
NFKB1P19838 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NFKB1P19838 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
NFKB1P19838 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NFKB1P19838 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NFKB1P19838 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NFKB1P19838 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NFKB1P19838 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NFKB1P19838 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
NFKB1P19838 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NFKB1P19838 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
NFKB1P19838 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NFKB1P19838 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NFKB1P19838 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NFKB1P19838 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NFKB1P19838 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.33■□□□□ 0.05
NFKB1P19838 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NFKB1P19838 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NFKB1P19838 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NFKB1P19838 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NFKB1P19838 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.33■□□□□ 0.04
NFKB1P19838 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.33■□□□□ 0.04
NFKB1P19838 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.33■□□□□ 0.04
NFKB1P19838 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 AP006294.1-201ENST00000415407 339 ntBASIC15.33■□□□□ 0.04
NFKB1P19838 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.33■□□□□ 0.04
NFKB1P19838 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 AC010319.3-201ENST00000597028 470 ntBASIC15.33■□□□□ 0.04
NFKB1P19838 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.33■□□□□ 0.04
NFKB1P19838 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.33■□□□□ 0.04
NFKB1P19838 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
NFKB1P19838 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NFKB1P19838 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NFKB1P19838 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NFKB1P19838 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 AC113367.3-201ENST00000508316 1912 ntBASIC15.33■□□□□ 0.04
NFKB1P19838 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NFKB1P19838 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NFKB1P19838 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
NFKB1P19838 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.32■□□□□ 0.04
NFKB1P19838 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NFKB1P19838 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.32■□□□□ 0.04
NFKB1P19838 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NFKB1P19838 AC007191.1-201ENST00000623179 2995 ntBASIC15.32■□□□□ 0.04
NFKB1P19838 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.32■□□□□ 0.04
NFKB1P19838 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
NFKB1P19838 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.32■□□□□ 0.04
NFKB1P19838 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.32■□□□□ 0.04
NFKB1P19838 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.32■□□□□ 0.04
NFKB1P19838 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.32■□□□□ 0.04
NFKB1P19838 MIR5189-201ENST00000577370 114 ntBASIC15.32■□□□□ 0.04
NFKB1P19838 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 AC004466.1-201ENST00000599515 1080 ntBASIC15.32■□□□□ 0.04
NFKB1P19838 AL589935.2-201ENST00000616471 1231 ntBASIC15.32■□□□□ 0.04
NFKB1P19838 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.32■□□□□ 0.04
NFKB1P19838 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.32■□□□□ 0.04
NFKB1P19838 AC025048.6-201ENST00000634326 1161 ntBASIC15.32■□□□□ 0.04
NFKB1P19838 AL603764.1-201ENST00000636452 321 ntBASIC15.32■□□□□ 0.04
NFKB1P19838 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.32■□□□□ 0.04
NFKB1P19838 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.32■□□□□ 0.04
NFKB1P19838 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.32■□□□□ 0.04
NFKB1P19838 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NFKB1P19838 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NFKB1P19838 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.32■□□□□ 0.04
NFKB1P19838 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NFKB1P19838 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.32■□□□□ 0.04
NFKB1P19838 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NFKB1P19838 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NFKB1P19838 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
NFKB1P19838 AL136379.1-201ENST00000623471 2642 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms