Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A2P16615 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A2P16615 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
ATP2A2P16615 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.72■□□□□ 0.27
ATP2A2P16615 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ATP2A2P16615 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ATP2A2P16615 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ATP2A2P16615 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ATP2A2P16615 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.72■□□□□ 0.27
ATP2A2P16615 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP2A2P16615 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP2A2P16615 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP2A2P16615 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP2A2P16615 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP2A2P16615 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.72■□□□□ 0.27
ATP2A2P16615 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 AC018892.3-201ENST00000623986 2499 ntBASIC16.72■□□□□ 0.27
ATP2A2P16615 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2A2P16615 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A2P16615 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ATP2A2P16615 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ATP2A2P16615 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A2P16615 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A2P16615 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A2P16615 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A2P16615 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
ATP2A2P16615 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.71■□□□□ 0.27
ATP2A2P16615 AL008707.1-201ENST00000422498 534 ntBASIC16.71■□□□□ 0.27
ATP2A2P16615 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP2A2P16615 RN7SL11P-201ENST00000471305 293 ntBASIC16.71■□□□□ 0.27
ATP2A2P16615 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A2P16615 AC134698.3-201ENST00000523880 214 ntBASIC16.71■□□□□ 0.27
ATP2A2P16615 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP2A2P16615 FGFR3P5-201ENST00000564496 886 ntBASIC16.71■□□□□ 0.27
ATP2A2P16615 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP2A2P16615 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATP2A2P16615 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP2A2P16615 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP2A2P16615 MYO15B-237ENST00000642007 4893 ntBASIC16.71■□□□□ 0.27
ATP2A2P16615 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ATP2A2P16615 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ATP2A2P16615 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.71■□□□□ 0.26
ATP2A2P16615 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ATP2A2P16615 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A2P16615 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 AC069224.1-201ENST00000566372 1715 ntBASIC16.7■□□□□ 0.26
ATP2A2P16615 TNRC18P2-201ENST00000417666 2714 ntBASIC16.7■□□□□ 0.26
ATP2A2P16615 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A2P16615 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP2A2P16615 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A2P16615 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A2P16615 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A2P16615 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP2A2P16615 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP2A2P16615 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.7■□□□□ 0.26
ATP2A2P16615 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP2A2P16615 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A2P16615 MIR3907-201ENST00000579424 151 ntBASIC16.7■□□□□ 0.26
ATP2A2P16615 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP2A2P16615 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP2A2P16615 AC091544.8-201ENST00000619490 361 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms