Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TOP1P11387 MIR1202-201ENST00000408529 83 ntBASIC17.72■□□□□ 0.43
TOP1P11387 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.72■□□□□ 0.43
TOP1P11387 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 YBX1P6-201ENST00000442962 1002 ntBASIC17.72■□□□□ 0.43
TOP1P11387 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.72■□□□□ 0.43
TOP1P11387 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.72■□□□□ 0.43
TOP1P11387 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.72■□□□□ 0.43
TOP1P11387 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.72■□□□□ 0.43
TOP1P11387 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.72■□□□□ 0.43
TOP1P11387 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TOP1P11387 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
TOP1P11387 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TOP1P11387 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP1P11387 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TOP1P11387 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.71■□□□□ 0.43
TOP1P11387 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP1P11387 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TOP1P11387 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TOP1P11387 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP1P11387 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 LILRP1-201ENST00000444199 1370 ntBASIC17.71■□□□□ 0.43
TOP1P11387 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP1P11387 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.71■□□□□ 0.43
TOP1P11387 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
TOP1P11387 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TOP1P11387 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.71■□□□□ 0.43
TOP1P11387 DUX4L45-201ENST00000566406 1057 ntBASIC17.71■□□□□ 0.43
TOP1P11387 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.71■□□□□ 0.43
TOP1P11387 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.71■□□□□ 0.43
TOP1P11387 AC004466.1-201ENST00000599515 1080 ntBASIC17.71■□□□□ 0.43
TOP1P11387 AL033527.4-201ENST00000641026 673 ntBASIC17.71■□□□□ 0.43
TOP1P11387 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TOP1P11387 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.71■□□□□ 0.43
TOP1P11387 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TOP1P11387 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TOP1P11387 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.71■□□□□ 0.42
TOP1P11387 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.7■□□□□ 0.42
TOP1P11387 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.7■□□□□ 0.42
TOP1P11387 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.7■□□□□ 0.42
TOP1P11387 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TOP1P11387 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.7■□□□□ 0.42
TOP1P11387 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TOP1P11387 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TOP1P11387 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TOP1P11387 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms