Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CALM3P0DP25 AC011840.2-201ENST00000563063 1520 ntBASIC17.46■□□□□ 0.39
CALM3P0DP25 CICP14-201ENST00000629111 2732 ntBASIC17.46■□□□□ 0.39
CALM3P0DP25 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CALM3P0DP25 AC023824.1-201ENST00000562945 2975 ntBASIC17.46■□□□□ 0.38
CALM3P0DP25 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CALM3P0DP25 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CALM3P0DP25 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CALM3P0DP25 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.45■□□□□ 0.38
CALM3P0DP25 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CALM3P0DP25 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.45■□□□□ 0.38
CALM3P0DP25 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.45■□□□□ 0.38
CALM3P0DP25 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.45■□□□□ 0.38
CALM3P0DP25 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.45■□□□□ 0.38
CALM3P0DP25 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.45■□□□□ 0.38
CALM3P0DP25 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.45■□□□□ 0.38
CALM3P0DP25 AC022210.1-201ENST00000449856 793 ntBASIC17.45■□□□□ 0.38
CALM3P0DP25 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.45■□□□□ 0.38
CALM3P0DP25 AL391280.1-201ENST00000506969 1062 ntBASIC17.45■□□□□ 0.38
CALM3P0DP25 AC023310.1-201ENST00000554836 735 ntBASIC17.45■□□□□ 0.38
CALM3P0DP25 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.45■□□□□ 0.38
CALM3P0DP25 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.45■□□□□ 0.38
CALM3P0DP25 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 MIR6775-201ENST00000617557 69 ntBASIC17.45■□□□□ 0.38
CALM3P0DP25 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CALM3P0DP25 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CALM3P0DP25 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CALM3P0DP25 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CALM3P0DP25 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CALM3P0DP25 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.45■□□□□ 0.38
CALM3P0DP25 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.44■□□□□ 0.38
CALM3P0DP25 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.44■□□□□ 0.38
CALM3P0DP25 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CALM3P0DP25 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.44■□□□□ 0.38
CALM3P0DP25 AC018529.2-202ENST00000611482 3087 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 ANKRD19P-201ENST00000338192 862 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.44■□□□□ 0.38
CALM3P0DP25 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 RN7SKP175-201ENST00000408472 289 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 MIR1202-201ENST00000408529 83 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.44■□□□□ 0.38
CALM3P0DP25 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CALM3P0DP25 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.44■□□□□ 0.38
CALM3P0DP25 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.44■□□□□ 0.38
CALM3P0DP25 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.44■□□□□ 0.38
CALM3P0DP25 IGHV3-71-201ENST00000523324 359 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 AC131206.1-201ENST00000538078 1211 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 SNX29P1-201ENST00000548357 1007 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.44■□□□□ 0.38
CALM3P0DP25 RN7SL713P-201ENST00000582127 302 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.44■□□□□ 0.38
CALM3P0DP25 MIR6805-201ENST00000615055 62 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 AC008687.7-202ENST00000637404 953 ntBASIC17.44■□□□□ 0.38
CALM3P0DP25 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CALM3P0DP25 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CALM3P0DP25 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CALM3P0DP25 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CALM3P0DP25 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.43■□□□□ 0.38
CALM3P0DP25 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CALM3P0DP25 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CALM3P0DP25 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms