Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC4P09017 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.56□□□□□ -0.08
HOXC4P09017 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.56□□□□□ -0.08
HOXC4P09017 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.56□□□□□ -0.08
HOXC4P09017 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC4P09017 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.56□□□□□ -0.08
HOXC4P09017 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC4P09017 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HOXC4P09017 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.56□□□□□ -0.08
HOXC4P09017 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
HOXC4P09017 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.56□□□□□ -0.08
HOXC4P09017 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HOXC4P09017 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HOXC4P09017 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HOXC4P09017 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.55□□□□□ -0.08
HOXC4P09017 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HOXC4P09017 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
HOXC4P09017 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC4P09017 AC005077.2-201ENST00000449786 690 ntBASIC14.55□□□□□ -0.08
HOXC4P09017 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.55□□□□□ -0.08
HOXC4P09017 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.55□□□□□ -0.08
HOXC4P09017 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.55□□□□□ -0.08
HOXC4P09017 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 AL160314.3-201ENST00000556041 767 ntBASIC14.55□□□□□ -0.08
HOXC4P09017 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 AC103988.2-201ENST00000561804 725 ntBASIC14.55□□□□□ -0.08
HOXC4P09017 MIR3619-201ENST00000579667 83 ntBASIC14.55□□□□□ -0.08
HOXC4P09017 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC4P09017 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 AL136172.1-201ENST00000598590 1394 ntBASIC14.55□□□□□ -0.08
HOXC4P09017 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
HOXC4P09017 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC4P09017 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.55□□□□□ -0.08
HOXC4P09017 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.55□□□□□ -0.08
HOXC4P09017 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HOXC4P09017 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HOXC4P09017 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXC4P09017 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXC4P09017 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 TCAF2P1-201ENST00000291129 2421 ntBASIC14.54□□□□□ -0.08
HOXC4P09017 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXC4P09017 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.54□□□□□ -0.08
HOXC4P09017 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXC4P09017 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HOXC4P09017 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXC4P09017 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXC4P09017 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 AL645933.1-201ENST00000440087 609 ntBASIC14.54□□□□□ -0.08
HOXC4P09017 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXC4P09017 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXC4P09017 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXC4P09017 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.54□□□□□ -0.08
HOXC4P09017 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXC4P09017 AC026740.1-201ENST00000607068 791 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 242.6 ms