Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.71□□□□□ -0.38
ABCA1O95477 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.71□□□□□ -0.38
ABCA1O95477 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ABCA1O95477 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.7□□□□□ -0.38
ABCA1O95477 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.7□□□□□ -0.38
ABCA1O95477 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ABCA1O95477 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.7□□□□□ -0.38
ABCA1O95477 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ABCA1O95477 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ABCA1O95477 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.7□□□□□ -0.38
ABCA1O95477 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.7□□□□□ -0.38
ABCA1O95477 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.7□□□□□ -0.38
ABCA1O95477 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.7□□□□□ -0.38
ABCA1O95477 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
ABCA1O95477 AC097359.3-201ENST00000603982 1210 ntBASIC12.7□□□□□ -0.38
ABCA1O95477 AL451050.2-201ENST00000606967 682 ntBASIC12.7□□□□□ -0.38
ABCA1O95477 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.7□□□□□ -0.38
ABCA1O95477 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
ABCA1O95477 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ABCA1O95477 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
ABCA1O95477 TPM3P8-201ENST00000330554 643 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.69□□□□□ -0.38
ABCA1O95477 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.69□□□□□ -0.38
ABCA1O95477 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 KLF2P2-201ENST00000416807 1039 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.69□□□□□ -0.38
ABCA1O95477 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.69□□□□□ -0.38
ABCA1O95477 RN7SL720P-201ENST00000488178 304 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.69□□□□□ -0.38
ABCA1O95477 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 AP003171.2-201ENST00000528208 925 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.69□□□□□ -0.38
ABCA1O95477 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
ABCA1O95477 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.69□□□□□ -0.38
ABCA1O95477 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.69□□□□□ -0.38
ABCA1O95477 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.69□□□□□ -0.38
ABCA1O95477 AC128714.1-201ENST00000637035 887 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.69□□□□□ -0.38
ABCA1O95477 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
ABCA1O95477 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.69□□□□□ -0.38
ABCA1O95477 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 AC023824.1-201ENST00000562945 2975 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ABCA1O95477 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.69□□□□□ -0.38
ABCA1O95477 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
ABCA1O95477 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.69□□□□□ -0.38
ABCA1O95477 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.69□□□□□ -0.38
ABCA1O95477 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.69□□□□□ -0.38
ABCA1O95477 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.69□□□□□ -0.38
ABCA1O95477 AL391280.1-201ENST00000506969 1062 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 RNA5SP486-201ENST00000515961 83 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.69□□□□□ -0.38
ABCA1O95477 AL645939.5-201ENST00000606834 243 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 AC007663.3-201ENST00000609632 465 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 MIR7845-201ENST00000618396 99 ntBASIC12.69□□□□□ -0.38
ABCA1O95477 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.69□□□□□ -0.38
ABCA1O95477 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.69□□□□□ -0.38
ABCA1O95477 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
ABCA1O95477 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ABCA1O95477 AC136621.1-201ENST00000624017 2304 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms