Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 AL136172.1-201ENST00000598590 1394 ntBASIC13.29□□□□□ -0.28
NPIPB4C9JG80 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 MSTO2P-201ENST00000314835 1709 ntBASIC13.28□□□□□ -0.28
NPIPB4C9JG80 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AC090505.1-201ENST00000430515 1834 ntBASIC13.28□□□□□ -0.28
NPIPB4C9JG80 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AL355864.2-201ENST00000447420 863 ntBASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPB4C9JG80 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPB4C9JG80 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 CD8B2-202ENST00000417670 633 ntBASIC13.27□□□□□ -0.29
NPIPB4C9JG80 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AP001889.1-201ENST00000525414 633 ntBASIC13.27□□□□□ -0.29
NPIPB4C9JG80 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AC025279.2-201ENST00000569730 653 ntBASIC13.27□□□□□ -0.29
NPIPB4C9JG80 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPB4C9JG80 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms