Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MAGEA7P-201ENST00000436482 942 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC092903.1-201ENST00000466506 262 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 HNRNPA3P6-201ENST00000472163 1006 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC007952.5-201ENST00000572818 1486 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 BX679664.3-201ENST00000414070 555 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC113935.1-201ENST00000471722 555 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC005777.1-201ENST00000588332 187 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC091769.1-201ENST00000619576 568 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AC245369.7-201ENST00000631386 350 ntBASIC18.32■□□□□ 0.52
RGPD3A6NKT7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 LAP3P2-201ENST00000454686 1454 ntBASIC18.31■□□□□ 0.52
RGPD3A6NKT7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 FAM21EP-201ENST00000417804 985 ntBASIC18.31■□□□□ 0.52
RGPD3A6NKT7 FAM197Y6-201ENST00000420524 766 ntBASIC18.31■□□□□ 0.52
RGPD3A6NKT7 AL356000.1-201ENST00000441073 1238 ntBASIC18.31■□□□□ 0.52
RGPD3A6NKT7 RHOQP2-201ENST00000449922 579 ntBASIC18.31■□□□□ 0.52
RGPD3A6NKT7 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 AC026336.4-201ENST00000624565 1050 ntBASIC18.31■□□□□ 0.52
RGPD3A6NKT7 BX322534.1-201ENST00000635574 241 ntBASIC18.31■□□□□ 0.52
RGPD3A6NKT7 AC215524.1-201ENST00000635696 241 ntBASIC18.31■□□□□ 0.52
RGPD3A6NKT7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RGPD3A6NKT7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 CCL25-202ENST00000315626 450 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 PRSS3P1-201ENST00000503996 742 ntBASIC18.3■□□□□ 0.52
RGPD3A6NKT7 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 LY6E-215ENST00000523847 427 ntTSL 3 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 AL021707.6-201ENST00000609212 491 ntBASIC18.3■□□□□ 0.52
RGPD3A6NKT7 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC18.3■□□□□ 0.52
RGPD3A6NKT7 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC18.3■□□□□ 0.52
RGPD3A6NKT7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms