Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TBC1D3FA6NER0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 NKAIN1P1-201ENST00000435754 582 ntBASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 KRT8P29-201ENST00000420409 1371 ntBASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TBC1D3FA6NER0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AC112693.3-201ENST00000624819 1983 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AP000845.1-201ENST00000581677 2131 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 SSR4P1-203ENST00000599569 2260 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 HIST2H2BC-201ENST00000498492 580 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AC005740.2-201ENST00000511085 419 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AL358472.3-201ENST00000608147 415 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AC138649.2-201ENST00000615886 705 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 AL023803.2-201ENST00000620080 638 ntBASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TBC1D3FA6NER0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 AC011840.2-201ENST00000563063 1520 ntBASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TBC1D3FA6NER0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TBC1D3FA6NER0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms