Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 SPDYE10P-202ENST00000612005 668 ntBASIC13□□□□□ -0.33
MEIS3P1A6NDR6 SPDYE8P-202ENST00000612377 668 ntBASIC13□□□□□ -0.33
MEIS3P1A6NDR6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MEIS3P1A6NDR6 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AC004870.1-201ENST00000315132 882 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 HIST3H2BA-201ENST00000436555 524 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 RN7SL589P-201ENST00000481268 310 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 KRT8P48-201ENST00000515599 1220 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 SLC25A39P2-201ENST00000537614 270 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AC104692.2-201ENST00000603054 253 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MEIS3P1A6NDR6 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MEIS3P1A6NDR6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms