Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 PDIA3P1-201ENST00000471856 1510 ntBASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 ANKRD19P-201ENST00000338192 862 ntBASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 AC007274.1-201ENST00000439805 662 ntBASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 AC104989.1-201ENST00000519711 778 ntBASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 MIR4259-201ENST00000584466 101 ntBASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 COX11-210ENST00000639671 696 ntBASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 TNRC18P2-201ENST00000417666 2714 ntBASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 AL009178.2-201ENST00000597278 2719 ntBASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
LRCOL1A6NCL2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 AC084364.1-201ENST00000551967 1556 ntBASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 AP005117.1-202ENST00000581724 1908 ntBASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LRCOL1A6NCL2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms