Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.88■□□□□ 0.29
COL4A3BPQ9Y5P4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 FAM197Y7-201ENST00000432892 766 ntBASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 AC079316.1-201ENST00000548397 411 ntBASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.87■□□□□ 0.29
COL4A3BPQ9Y5P4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 AL390755.1-201ENST00000623716 2027 ntBASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 AC132938.4-201ENST00000623835 848 ntBASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 AL033527.4-201ENST00000641026 673 ntBASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL4A3BPQ9Y5P4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A3BPQ9Y5P4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms