Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 IL9RP3-201ENST00000442856 1674 ntBASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZC3H4Q9UPT8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZC3H4Q9UPT8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZC3H4Q9UPT8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.02■□□□□ 0.47
ZC3H4Q9UPT8 AC092364.2-201ENST00000596710 2692 ntBASIC18.02■□□□□ 0.47
ZC3H4Q9UPT8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZC3H4Q9UPT8 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 AL357373.1-201ENST00000394974 322 ntBASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 RN7SL396P-201ENST00000471086 295 ntBASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 AC144522.1-201ENST00000625111 1658 ntBASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZC3H4Q9UPT8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 RN7SKP230-201ENST00000365642 335 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 RPL5P21-201ENST00000404620 815 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 CR383656.3-201ENST00000551315 183 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 MIR3180-2-201ENST00000581748 88 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 AL451007.2-201ENST00000632004 563 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 AC104640.1-201ENST00000562617 2109 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 AC079328.2-201ENST00000561241 3354 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FAM90A21P-201ENST00000510875 1396 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FAM90A15P-201ENST00000514465 1395 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FAM90A6P-201ENST00000515148 1394 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FAM90A16P-201ENST00000526662 1395 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FAM90A9P-201ENST00000527940 1395 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FAM90A5P-201ENST00000528738 1395 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FAM90A14P-201ENST00000530386 1395 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 FAM90A13P-201ENST00000534703 1395 ntBASIC18■□□□□ 0.47
ZC3H4Q9UPT8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18■□□□□ 0.47
ZC3H4Q9UPT8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 FAM86B3P-203ENST00000523992 854 ntBASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 AL138725.1-201ENST00000407347 1314 ntBASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZC3H4Q9UPT8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms