Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AC023024.2-201ENST00000623561 1993 ntBASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AC078819.1-201ENST00000547454 765 ntBASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AC012085.1-201ENST00000548270 765 ntBASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NPIPA1Q9UND3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA1Q9UND3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.96□□□□□ -0.18
NPIPA1Q9UND3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.96□□□□□ -0.18
NPIPA1Q9UND3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NPIPA1Q9UND3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA1Q9UND3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NPIPA1Q9UND3 AC020907.1-201ENST00000616460 1350 ntBASIC13.96□□□□□ -0.18
NPIPA1Q9UND3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 AC243960.2-201ENST00000600996 747 ntBASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 AC025181.2-201ENST00000606994 802 ntBASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 AC103702.1-201ENST00000548801 2630 ntBASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NPIPA1Q9UND3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms