Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.31■□□□□ 0.52
ECHDC1Q9NTX5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 ANKRD19P-201ENST00000338192 862 ntBASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 MIR1909-201ENST00000411312 80 ntBASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 CTBP2P5-201ENST00000454986 1264 ntBASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 ACA64.2-201ENST00000459014 129 ntBASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 RHOXF1P1-202ENST00000635473 501 ntBASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 AC020910.5-201ENST00000623668 1865 ntBASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 AP000593.2-201ENST00000542775 1433 ntBASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.3■□□□□ 0.52
ECHDC1Q9NTX5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 FAM8A4P-201ENST00000435433 1213 ntBASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 KLF2P4-201ENST00000451959 1225 ntBASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 AC131206.1-201ENST00000538078 1211 ntBASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 HILS1-202ENST00000545329 423 ntBASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 SNX29P1-201ENST00000548357 1007 ntBASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ECHDC1Q9NTX5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ECHDC1Q9NTX5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms