Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 PDIA3P1-201ENST00000471856 1510 ntBASIC16.05■□□□□ 0.16
CISHQ9NSE2 AC003102.2-201ENST00000589195 1469 ntBASIC16.05■□□□□ 0.16
CISHQ9NSE2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 AC079776.1-201ENST00000401540 1152 ntBASIC16.05■□□□□ 0.16
CISHQ9NSE2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 AC138466.3-201ENST00000619983 221 ntBASIC16.05■□□□□ 0.16
CISHQ9NSE2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.05■□□□□ 0.16
CISHQ9NSE2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CISHQ9NSE2 AC007686.3-201ENST00000619017 3487 ntBASIC16.04■□□□□ 0.16
CISHQ9NSE2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 AC007969.1-201ENST00000433675 447 ntBASIC16.04■□□□□ 0.16
CISHQ9NSE2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 AC078819.1-201ENST00000547454 765 ntBASIC16.04■□□□□ 0.16
CISHQ9NSE2 AC012085.1-201ENST00000548270 765 ntBASIC16.04■□□□□ 0.16
CISHQ9NSE2 RAB43P1-201ENST00000561790 589 ntBASIC16.04■□□□□ 0.16
CISHQ9NSE2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 AL512343.1-201ENST00000605837 169 ntBASIC16.04■□□□□ 0.16
CISHQ9NSE2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 SALL4P5-201ENST00000419001 1760 ntBASIC16.04■□□□□ 0.16
CISHQ9NSE2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.04■□□□□ 0.16
CISHQ9NSE2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CISHQ9NSE2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CISHQ9NSE2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.03■□□□□ 0.16
CISHQ9NSE2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CISHQ9NSE2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CISHQ9NSE2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.03■□□□□ 0.16
CISHQ9NSE2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms