Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.91□□□□□ -0.18
SDHAF3Q9NRP4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AP000845.1-201ENST00000581677 2131 ntBASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AC008735.3-201ENST00000596646 500 ntBASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 LILRP1-201ENST00000444199 1370 ntBASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SDHAF3Q9NRP4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SDHAF3Q9NRP4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
SDHAF3Q9NRP4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SDHAF3Q9NRP4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SDHAF3Q9NRP4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SDHAF3Q9NRP4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SDHAF3Q9NRP4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AC006058.4-201ENST00000624016 1670 ntBASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 HLA-K-203ENST00000430151 1046 ntBASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AP001889.1-201ENST00000525414 633 ntBASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 AC132938.4-201ENST00000623835 848 ntBASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.89□□□□□ -0.19
SDHAF3Q9NRP4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms