Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNA5SP406-201ENST00000516106 112 ntBASIC13.63□□□□□ -0.23
CHD8Q9HCK8 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 AC092127.1-201ENST00000567093 3455 ntBASIC13.63□□□□□ -0.23
CHD8Q9HCK8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 AC138761.6-201ENST00000583997 1423 ntBASIC13.63□□□□□ -0.23
CHD8Q9HCK8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 MBP-230ENST00000528160 584 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 MST1L-204ENST00000545160 559 ntTSL 4 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 MIR4746-201ENST00000579802 71 ntBASIC13.63□□□□□ -0.23
CHD8Q9HCK8 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CHD8Q9HCK8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AC003686.1-201ENST00000550956 1034 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 EMP3-204ENST00000596315 761 ntTSL 2 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AC245369.7-201ENST00000631386 350 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AL513523.2-202ENST00000427283 2040 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AC006372.4-201ENST00000624122 1543 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 OR8T1P-201ENST00000421347 918 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AC131206.1-201ENST00000538078 1211 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 ABCC6P1-203ENST00000565566 1170 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 ACTBP9-201ENST00000587663 1099 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 AP001462.1-201ENST00000594089 452 ntBASIC13.62□□□□□ -0.23
CHD8Q9HCK8 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CHD8Q9HCK8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHD8Q9HCK8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHD8Q9HCK8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CHD8Q9HCK8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CHD8Q9HCK8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.61□□□□□ -0.23
CHD8Q9HCK8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.61□□□□□ -0.23
CHD8Q9HCK8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms