Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EFCC1Q9HA90 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 RPL13AP19-201ENST00000434320 584 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 HIST2H2BB-201ENST00000449108 381 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 RN7SL8P-201ENST00000461771 266 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 RN7SL181P-201ENST00000462921 277 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 AC100850.1-201ENST00000506768 649 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 IGLV3-15-201ENST00000518356 244 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 OR10B1P-201ENST00000601666 907 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 AC073413.1-201ENST00000603927 732 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 AP003680.1-201ENST00000598970 3660 ntBASIC17.56■□□□□ 0.4
EFCC1Q9HA90 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EFCC1Q9HA90 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AC026316.1-201ENST00000398900 414 ntBASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 EIF3FP3-201ENST00000434851 1086 ntBASIC17.55■□□□□ 0.4
EFCC1Q9HA90 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 RN7SL163P-201ENST00000583100 276 ntBASIC17.55■□□□□ 0.4
EFCC1Q9HA90 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AC020922.3-201ENST00000595064 547 ntBASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AC103691.2-201ENST00000618824 433 ntBASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 KRT8P14-201ENST00000414254 1442 ntBASIC17.55■□□□□ 0.4
EFCC1Q9HA90 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EFCC1Q9HA90 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms