Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 RCC2P8-201ENST00000502779 1035 ntBASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 AC007718.1-201ENST00000621078 280 ntBASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.6■□□□□ 0.25
UBE2OQ9C0C9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 FO393412.1-201ENST00000619841 382 ntBASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AL162426.1-201ENST00000624141 743 ntBASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AL132780.4-201ENST00000624870 1135 ntBASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 PAUPAR-201ENST00000630360 2965 ntBASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBE2OQ9C0C9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
UBE2OQ9C0C9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 AC138894.2-201ENST00000602838 371 ntBASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.58■□□□□ 0.24
UBE2OQ9C0C9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms