Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC003686.1-201ENST00000550956 1034 ntBASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC073869.4-201ENST00000620841 800 ntBASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 AP000974.1-201ENST00000623909 2387 ntBASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.8□□□□□ -0.04
COL25A1Q9BXS0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 AC022080.1-201ENST00000366255 781 ntBASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 RN7SL487P-201ENST00000468140 344 ntBASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 RN7SL523P-201ENST00000484401 298 ntBASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 AL450346.2-201ENST00000495602 1024 ntBASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 RN7SL202P-201ENST00000584410 262 ntBASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 MIR6165-201ENST00000614803 84 ntBASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.79□□□□□ -0.04
COL25A1Q9BXS0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AL365181.1-201ENST00000564032 1828 ntBASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 SOD1-202ENST00000389995 865 ntTSL 3 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AKR1B10P2-201ENST00000577332 927 ntBASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 PDLIM1P1-201ENST00000604187 969 ntBASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AC010531.8-201ENST00000623341 685 ntBASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.78□□□□□ -0.04
COL25A1Q9BXS0 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms