Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 DUX4L47-201ENST00000566374 394 ntBASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 ENPP7P14-201ENST00000621765 1040 ntBASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPAP1Q9BWH6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 POM121L10P-201ENST00000436994 1285 ntBASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 BX284668.4-201ENST00000453917 508 ntBASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 IGHJ2P-201ENST00000454480 60 ntBASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 RHOQP1-201ENST00000555758 579 ntBASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 AC244452.3-201ENST00000636814 210 ntBASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 AC018735.1-201ENST00000437208 1502 ntBASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPAP1Q9BWH6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 CICP14-201ENST00000629111 2732 ntBASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 AC022616.1-201ENST00000518688 554 ntBASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 AC104982.3-201ENST00000581995 514 ntBASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 AC106872.11-201ENST00000605838 421 ntBASIC18.21■□□□□ 0.51
RPAP1Q9BWH6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms