Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.22■□□□□ 0.03
NDNQ99608 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
NDNQ99608 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NDNQ99608 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
NDNQ99608 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NDNQ99608 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.21■□□□□ 0.03
NDNQ99608 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NDNQ99608 AC027601.5-201ENST00000624065 2482 ntBASIC15.21■□□□□ 0.03
NDNQ99608 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NDNQ99608 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NDNQ99608 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NDNQ99608 BASP1P1-201ENST00000430708 665 ntBASIC15.21■□□□□ 0.03
NDNQ99608 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.21■□□□□ 0.03
NDNQ99608 RFPL4AP1-201ENST00000530883 850 ntBASIC15.21■□□□□ 0.03
NDNQ99608 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
NDNQ99608 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
NDNQ99608 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.21■□□□□ 0.03
NDNQ99608 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.21■□□□□ 0.03
NDNQ99608 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.21■□□□□ 0.03
NDNQ99608 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.21■□□□□ 0.03
NDNQ99608 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.21■□□□□ 0.03
NDNQ99608 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.21■□□□□ 0.03
NDNQ99608 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDNQ99608 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NDNQ99608 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDNQ99608 BEND3P1-201ENST00000421591 1944 ntBASIC15.21■□□□□ 0.02
NDNQ99608 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDNQ99608 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NDNQ99608 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
NDNQ99608 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NDNQ99608 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDNQ99608 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDNQ99608 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDNQ99608 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.2■□□□□ 0.02
NDNQ99608 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.2■□□□□ 0.02
NDNQ99608 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.2■□□□□ 0.02
NDNQ99608 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NDNQ99608 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NDNQ99608 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.2■□□□□ 0.02
NDNQ99608 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 GNAQP1-201ENST00000444815 1067 ntBASIC15.2■□□□□ 0.02
NDNQ99608 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.2■□□□□ 0.02
NDNQ99608 AC092183.1-201ENST00000469884 875 ntBASIC15.2■□□□□ 0.02
NDNQ99608 FAM86LP-201ENST00000478302 853 ntBASIC15.2■□□□□ 0.02
NDNQ99608 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.2■□□□□ 0.02
NDNQ99608 DOC2GP-202ENST00000514950 1163 ntBASIC15.2■□□□□ 0.02
NDNQ99608 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.2■□□□□ 0.02
NDNQ99608 TPRX2P-201ENST00000535362 881 ntBASIC15.2■□□□□ 0.02
NDNQ99608 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.2■□□□□ 0.02
NDNQ99608 AC036164.1-201ENST00000570544 333 ntBASIC15.2■□□□□ 0.02
NDNQ99608 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.2■□□□□ 0.02
NDNQ99608 GPALPP1-207ENST00000611650 899 ntBASIC15.2■□□□□ 0.02
NDNQ99608 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.2■□□□□ 0.02
NDNQ99608 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.2■□□□□ 0.02
NDNQ99608 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDNQ99608 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms