Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 HINT2P1-201ENST00000419438 481 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 Z97180.1-201ENST00000445173 988 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 RNMTL1P1-201ENST00000454103 560 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AC024681.1-201ENST00000521917 487 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 RN7SL163P-201ENST00000583100 276 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AC005324.6-201ENST00000587972 613 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AC009955.4-201ENST00000597192 544 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 DBET-201ENST00000630918 3363 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AL157414.3-201ENST00000624276 1954 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 REXO1L4P-201ENST00000605109 1937 ntBASIC17.06■□□□□ 0.32
SYNGAP1Q96PV0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AC008132.1-202ENST00000342005 1389 ntBASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 MAGEA5-201ENST00000446757 942 ntBASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AC138696.2-201ENST00000607376 223 ntBASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AL136301.1-201ENST00000615830 422 ntBASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 AC004899.1-201ENST00000424687 1714 ntBASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNGAP1Q96PV0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms