Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 HIST3H2BA-201ENST00000436555 524 ntBASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 RNA5SP415-201ENST00000517246 115 ntBASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 MIR497HG-202ENST00000572453 3838 ntBASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLPTM1LQ96KA5 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AC068760.1-201ENST00000493579 1953 ntBASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 UNC93B7-201ENST00000509439 705 ntBASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AL135744.1-201ENST00000565098 629 ntBASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AC114271.1-201ENST00000612689 2813 ntBASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPTM1LQ96KA5 AC073548.1-201ENST00000624088 1882 ntBASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 AC118758.2-201ENST00000614242 2813 ntBASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 AC018665.1-201ENST00000622927 1362 ntBASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CLPTM1LQ96KA5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.52□□□□□ -0.09
CLPTM1LQ96KA5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPTM1LQ96KA5 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPTM1LQ96KA5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPTM1LQ96KA5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLPTM1LQ96KA5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.52□□□□□ -0.09
CLPTM1LQ96KA5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.52□□□□□ -0.09
CLPTM1LQ96KA5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms