Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 AC022447.6-201ENST00000515522 438 ntBASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 RN7SL48P-201ENST00000579283 293 ntBASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 INTS4P1-203ENST00000641008 3683 ntBASIC14.69□□□□□ -0.06
PDLIM5Q96HC4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 AC134312.5-201ENST00000568031 1313 ntBASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 AC098614.1-201ENST00000368528 745 ntBASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 POM121L8P-201ENST00000417732 1281 ntBASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 AC245100.3-201ENST00000441281 285 ntBASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 POM121L9P-203ENST00000441984 1285 ntBASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 PTP4A1P2-201ENST00000546033 454 ntBASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 AC145423.3-201ENST00000615987 467 ntBASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 AL138709.1-201ENST00000614840 1693 ntBASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PDLIM5Q96HC4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PDLIM5Q96HC4 HSPA7-201ENST00000445535 1927 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 275.5 ms