Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCA5Q96FF9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 PCDHB19P-201ENST00000570871 2371 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 KRT17P5-201ENST00000332088 839 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 GUSBP10-201ENST00000417412 665 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 GCSHP3-201ENST00000431120 391 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 RN7SL530P-201ENST00000485097 298 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 AC138701.2-201ENST00000553634 226 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 AL118516.1-201ENST00000564152 670 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 AP000322.3-201ENST00000608665 388 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 AC148477.9-201ENST00000623974 539 ntBASIC17.31■□□□□ 0.36
CDCA5Q96FF9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CDCA5Q96FF9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 AC093909.3-201ENST00000504783 336 ntBASIC17.3■□□□□ 0.36
CDCA5Q96FF9 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 HERC2P11-201ENST00000562845 725 ntBASIC17.3■□□□□ 0.36
CDCA5Q96FF9 AC100756.2-201ENST00000569537 736 ntBASIC17.3■□□□□ 0.36
CDCA5Q96FF9 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 AL451007.2-201ENST00000632004 563 ntBASIC17.3■□□□□ 0.36
CDCA5Q96FF9 AC002472.4-201ENST00000641915 272 ntBASIC17.3■□□□□ 0.36
CDCA5Q96FF9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCA5Q96FF9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA5Q96FF9 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCA5Q96FF9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.29■□□□□ 0.36
CDCA5Q96FF9 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms