Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 DDX39AP1-201ENST00000445147 1181 ntBASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 DPY19L2P5-201ENST00000456300 331 ntBASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM43Q96BQ3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRIM43Q96BQ3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.08■□□□□ 0.17
TRIM43Q96BQ3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.08■□□□□ 0.17
TRIM43Q96BQ3 AC007292.2-201ENST00000593524 1812 ntBASIC16.08■□□□□ 0.17
TRIM43Q96BQ3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.08■□□□□ 0.17
TRIM43Q96BQ3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.08■□□□□ 0.17
TRIM43Q96BQ3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 KRT17P4-201ENST00000429445 819 ntBASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 RNA5SP417-201ENST00000516459 108 ntBASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 AC024909.3-201ENST00000611513 2257 ntBASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM43Q96BQ3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 PCDHA14-201ENST00000506751 2298 ntBASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 GUSBP10-201ENST00000417412 665 ntBASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 OR2R1P-201ENST00000441404 914 ntBASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 AC003686.1-201ENST00000550956 1034 ntBASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 LILRP1-201ENST00000444199 1370 ntBASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM43Q96BQ3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms