Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.4■□□□□ 0.54
RPGRQ92834 AL109837.1-201ENST00000603272 613 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 AC103810.10-201ENST00000606504 343 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.4■□□□□ 0.54
RPGRQ92834 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.4■□□□□ 0.54
RPGRQ92834 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RPGRQ92834 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.4■□□□□ 0.54
RPGRQ92834 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.4■□□□□ 0.54
RPGRQ92834 FAM90A2P-201ENST00000511144 1395 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 FAM90A25P-201ENST00000528404 1395 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.4■□□□□ 0.54
RPGRQ92834 AC099398.1-201ENST00000567919 2776 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPGRQ92834 AC020916.1-201ENST00000587762 1774 ntBASIC18.4■□□□□ 0.54
RPGRQ92834 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPGRQ92834 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPGRQ92834 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPGRQ92834 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPGRQ92834 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.39■□□□□ 0.54
RPGRQ92834 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPGRQ92834 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPGRQ92834 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.39■□□□□ 0.53
RPGRQ92834 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RPGRQ92834 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.39■□□□□ 0.53
RPGRQ92834 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.39■□□□□ 0.53
RPGRQ92834 RPL8P2-201ENST00000430538 502 ntBASIC18.39■□□□□ 0.53
RPGRQ92834 AL157407.1-201ENST00000435784 904 ntBASIC18.39■□□□□ 0.53
RPGRQ92834 AC078991.1-201ENST00000437297 610 ntBASIC18.39■□□□□ 0.53
RPGRQ92834 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.39■□□□□ 0.53
RPGRQ92834 RN7SL8P-201ENST00000461771 266 ntBASIC18.39■□□□□ 0.53
RPGRQ92834 AC006122.1-201ENST00000493323 440 ntBASIC18.39■□□□□ 0.53
RPGRQ92834 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RPGRQ92834 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.39■□□□□ 0.53
RPGRQ92834 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC18.39■□□□□ 0.53
RPGRQ92834 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.39■□□□□ 0.53
RPGRQ92834 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.39■□□□□ 0.53
RPGRQ92834 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.39■□□□□ 0.53
RPGRQ92834 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.39■□□□□ 0.53
RPGRQ92834 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.39■□□□□ 0.53
RPGRQ92834 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.39■□□□□ 0.53
RPGRQ92834 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.39■□□□□ 0.53
RPGRQ92834 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.39■□□□□ 0.53
RPGRQ92834 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.39■□□□□ 0.53
RPGRQ92834 CAP2P1-201ENST00000557743 1390 ntBASIC18.39■□□□□ 0.53
RPGRQ92834 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RPGRQ92834 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RPGRQ92834 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.39■□□□□ 0.53
RPGRQ92834 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RPGRQ92834 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPGRQ92834 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 AC144522.1-201ENST00000625111 1658 ntBASIC18.38■□□□□ 0.53
RPGRQ92834 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.38■□□□□ 0.53
RPGRQ92834 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.38■□□□□ 0.53
RPGRQ92834 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.38■□□□□ 0.53
RPGRQ92834 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.38■□□□□ 0.53
RPGRQ92834 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.38■□□□□ 0.53
RPGRQ92834 AL035414.1-201ENST00000451327 857 ntBASIC18.38■□□□□ 0.53
RPGRQ92834 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.38■□□□□ 0.53
RPGRQ92834 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.38■□□□□ 0.53
RPGRQ92834 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.38■□□□□ 0.53
RPGRQ92834 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.38■□□□□ 0.53
RPGRQ92834 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.38■□□□□ 0.53
RPGRQ92834 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPGRQ92834 AC026803.1-201ENST00000569130 274 ntBASIC18.38■□□□□ 0.53
RPGRQ92834 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.38■□□□□ 0.53
RPGRQ92834 AC087045.2-201ENST00000606279 1003 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms