Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC010551.1-201ENST00000568458 469 ntTSL 4 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 CENPP-204ENST00000618653 570 ntTSL 2 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 CPA4-210ENST00000493259 1512 ntTSL 2 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 SPATA22-203ENST00000397168 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 S100A1-203ENST00000368698 784 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 PGAM1P2-201ENST00000436071 725 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 DUX4L50-201ENST00000455245 715 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 RN7SL76P-201ENST00000482435 289 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC026434.2-201ENST00000506094 1078 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AL359219.1-201ENST00000556311 934 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC013472.3-201ENST00000607407 659 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 CHIAP2-204ENST00000532686 1449 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 RN7SL556P-201ENST00000582856 298 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC020763.2-201ENST00000623155 1255 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 TPI1P3-201ENST00000335020 740 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 KCNK16-202ENST00000373229 1248 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SERPINB8P1-201ENST00000401898 377 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 TTC32-202ENST00000402414 735 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 ACTG1P23-201ENST00000437653 1074 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AL157414.3-201ENST00000624276 1954 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AP003680.1-201ENST00000598970 3660 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 GGT8P-201ENST00000418938 532 ntBASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SYNE2Q8WXH0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms