Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
STAG1Q8WVM7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 BRWD1P1-201ENST00000401091 371 ntBASIC17.69■□□□□ 0.42
STAG1Q8WVM7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 ZACNP1-201ENST00000612259 710 ntBASIC17.69■□□□□ 0.42
STAG1Q8WVM7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.69■□□□□ 0.42
STAG1Q8WVM7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 C8orf49-201ENST00000525043 1968 ntBASIC17.68■□□□□ 0.42
STAG1Q8WVM7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 AL136309.1-201ENST00000403917 691 ntBASIC17.68■□□□□ 0.42
STAG1Q8WVM7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 RPL13AP20-201ENST00000459725 609 ntBASIC17.68■□□□□ 0.42
STAG1Q8WVM7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 GCOM2-201ENST00000509133 1104 ntBASIC17.68■□□□□ 0.42
STAG1Q8WVM7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 RN7SL560P-201ENST00000577943 264 ntBASIC17.68■□□□□ 0.42
STAG1Q8WVM7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 AC018529.2-202ENST00000611482 3087 ntBASIC17.68■□□□□ 0.42
STAG1Q8WVM7 MIR6869-201ENST00000619434 62 ntBASIC17.68■□□□□ 0.42
STAG1Q8WVM7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
STAG1Q8WVM7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
STAG1Q8WVM7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
STAG1Q8WVM7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.67■□□□□ 0.42
STAG1Q8WVM7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
STAG1Q8WVM7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
STAG1Q8WVM7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
STAG1Q8WVM7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
STAG1Q8WVM7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms