Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.97■□□□□ 0.47
SNED1Q8TER0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNED1Q8TER0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.97■□□□□ 0.47
SNED1Q8TER0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 AHCYP4-201ENST00000419201 1315 ntBASIC17.96■□□□□ 0.47
SNED1Q8TER0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNED1Q8TER0 LINC01815-202ENST00000641468 1409 ntBASIC17.96■□□□□ 0.47
SNED1Q8TER0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SNED1Q8TER0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SNED1Q8TER0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
SNED1Q8TER0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SNED1Q8TER0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
SNED1Q8TER0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.96■□□□□ 0.46
SNED1Q8TER0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.95■□□□□ 0.46
SNED1Q8TER0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 AC087392.5-201ENST00000612517 489 ntBASIC17.95■□□□□ 0.46
SNED1Q8TER0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SNED1Q8TER0 SSR4P1-203ENST00000599569 2260 ntBASIC17.95■□□□□ 0.46
SNED1Q8TER0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNED1Q8TER0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.94■□□□□ 0.46
SNED1Q8TER0 LINC00634-202ENST00000505157 222 ntBASIC17.94■□□□□ 0.46
SNED1Q8TER0 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.94■□□□□ 0.46
SNED1Q8TER0 NUDT4P2-201ENST00000578341 546 ntBASIC17.94■□□□□ 0.46
SNED1Q8TER0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.94■□□□□ 0.46
SNED1Q8TER0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNED1Q8TER0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms