Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHD5Q8TDI0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CHD5Q8TDI0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.05■□□□□ -0
CHD5Q8TDI0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.05■□□□□ -0
CHD5Q8TDI0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.05■□□□□ -0
CHD5Q8TDI0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.05■□□□□ -0
CHD5Q8TDI0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.05■□□□□ -0
CHD5Q8TDI0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.05■□□□□ -0
CHD5Q8TDI0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHD5Q8TDI0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.05■□□□□ -0
CHD5Q8TDI0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.05■□□□□ -0
CHD5Q8TDI0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.05■□□□□ -0
CHD5Q8TDI0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.05■□□□□ -0
CHD5Q8TDI0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHD5Q8TDI0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.05■□□□□ -0
CHD5Q8TDI0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.05■□□□□ -0
CHD5Q8TDI0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.05■□□□□ -0
CHD5Q8TDI0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CHD5Q8TDI0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CHD5Q8TDI0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.04■□□□□ -0
CHD5Q8TDI0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.04■□□□□ -0
CHD5Q8TDI0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CHD5Q8TDI0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.04■□□□□ -0
CHD5Q8TDI0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.04■□□□□ -0
CHD5Q8TDI0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.04■□□□□ -0
CHD5Q8TDI0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.04■□□□□ -0
CHD5Q8TDI0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CHD5Q8TDI0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.04■□□□□ -0
CHD5Q8TDI0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 AC023310.1-201ENST00000554836 735 ntBASIC15.04■□□□□ -0
CHD5Q8TDI0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CHD5Q8TDI0 AC008825.2-201ENST00000603374 718 ntBASIC15.04■□□□□ -0
CHD5Q8TDI0 AL136301.1-201ENST00000615830 422 ntBASIC15.04■□□□□ -0
CHD5Q8TDI0 PKD1P1-201ENST00000458669 6805 ntBASIC15.04■□□□□ -0
CHD5Q8TDI0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CHD5Q8TDI0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 AC106881.1-201ENST00000605849 3329 ntBASIC15.04■□□□□ -0
CHD5Q8TDI0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.04■□□□□ -0
CHD5Q8TDI0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 E2F3P2-201ENST00000447755 1422 ntBASIC15.04■□□□□ -0
CHD5Q8TDI0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.04■□□□□ -0
CHD5Q8TDI0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 AC022447.6-201ENST00000515522 438 ntBASIC15.04■□□□□ -0
CHD5Q8TDI0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.04■□□□□ -0
CHD5Q8TDI0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHD5Q8TDI0 DUX4L46-201ENST00000566845 751 ntBASIC15.04■□□□□ -0
CHD5Q8TDI0 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.04■□□□□ -0
CHD5Q8TDI0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.04■□□□□ -0
CHD5Q8TDI0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHD5Q8TDI0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CHD5Q8TDI0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 AC097359.2-201ENST00000604992 2389 ntBASIC15.03■□□□□ -0
CHD5Q8TDI0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.03■□□□□ -0
CHD5Q8TDI0 AC113367.3-201ENST00000508316 1912 ntBASIC15.03■□□□□ -0
CHD5Q8TDI0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.03■□□□□ -0
CHD5Q8TDI0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CHD5Q8TDI0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 AC004899.1-201ENST00000424687 1714 ntBASIC15.03■□□□□ -0
CHD5Q8TDI0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CHD5Q8TDI0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 BX640514.1-201ENST00000583223 1918 ntBASIC15.03■□□□□ -0
CHD5Q8TDI0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.03■□□□□ -0
CHD5Q8TDI0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CHD5Q8TDI0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CHD5Q8TDI0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.03■□□□□ -0
CHD5Q8TDI0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHD5Q8TDI0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.03■□□□□ -0
CHD5Q8TDI0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.03■□□□□ -0
CHD5Q8TDI0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.03■□□□□ -0
CHD5Q8TDI0 AL160314.3-201ENST00000556041 767 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms