Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AL008721.1-201ENST00000609964 604 ntBASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 DBET-201ENST00000630918 3363 ntBASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAM1L1Q8N609 LINC01101-201ENST00000622953 1884 ntBASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 AC013726.1-201ENST00000563747 2285 ntBASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 PCDHA3-202ENST00000532566 4594 ntBASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 RN7SKP175-201ENST00000408472 289 ntBASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 YBX1P6-201ENST00000442962 1002 ntBASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 CNN2P10-201ENST00000443067 918 ntBASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 DUX4L45-201ENST00000566406 1057 ntBASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 AC018442.1-201ENST00000421439 2061 ntBASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAM1L1Q8N609 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAM1L1Q8N609 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms