Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 C8orf49-201ENST00000525043 1968 ntBASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 AC093214.1-201ENST00000511688 1107 ntBASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HIST3H2AQ7L7L0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.83□□□□□ -0.19
HIST3H2AQ7L7L0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.83□□□□□ -0.19
HIST3H2AQ7L7L0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.83□□□□□ -0.19
HIST3H2AQ7L7L0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HIST3H2AQ7L7L0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HIST3H2AQ7L7L0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 MEP1AP4-201ENST00000423244 1087 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AC004890.2-204ENST00000481968 304 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 RPL13AP25-201ENST00000484130 612 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 TPRX2P-201ENST00000535362 881 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 RARRES2P5-201ENST00000564013 466 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AC008738.7-201ENST00000609744 511 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 GPALPP1-207ENST00000611650 899 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 AC007787.1-201ENST00000588095 1583 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 CICP14-201ENST00000629111 2732 ntBASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HIST3H2AQ7L7L0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST3H2AQ7L7L0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms