Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 LAP3P2-201ENST00000454686 1454 ntBASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AL627230.2-201ENST00000613254 655 ntBASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AC019109.1-201ENST00000401725 1874 ntBASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 RN7SL494P-201ENST00000461517 304 ntBASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 HCG27-204ENST00000424675 895 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 MIR3180-2-201ENST00000581748 88 ntBASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 GEMIN8P4-201ENST00000380526 729 ntBASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AC007250.1-201ENST00000608934 338 ntBASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AC006483.2-201ENST00000609813 515 ntBASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AL357373.1-201ENST00000394974 322 ntBASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 AC087392.5-201ENST00000612517 489 ntBASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC9.78□□□□□ -0.84
VPS13DQ5THJ4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms