Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 COX5BP8-201ENST00000416911 349 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AL442647.2-201ENST00000429864 857 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AC026410.3-201ENST00000514280 936 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AC005225.4-201ENST00000557330 545 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AC120045.2-201ENST00000567334 178 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AC107373.2-201ENST00000607735 490 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 RPSAP52-203ENST00000622976 1023 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 CICP11-201ENST00000434745 2827 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 ZBED1P1-201ENST00000502364 1930 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 MBLAC2-202ENST00000514906 1936 ntBASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KHDC1Q4VXA5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 AC027307.3-201ENST00000594262 1100 ntBASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 AC012645.4-201ENST00000610691 1061 ntBASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.32■□□□□ 0.04
KHDC1Q4VXA5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 PCDHA3-202ENST00000532566 4594 ntBASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KHDC1Q4VXA5 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms