Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 AC005912.2-201ENST00000619492 2400 ntBASIC13.2□□□□□ -0.3
HIST1H3AP68431 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H3AP68431 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H3AP68431 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 AC093433.1-201ENST00000458048 571 ntBASIC13.19□□□□□ -0.3
HIST1H3AP68431 TERF1P3-201ENST00000505638 1227 ntBASIC13.19□□□□□ -0.3
HIST1H3AP68431 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 CU634019.7-201ENST00000624153 1185 ntBASIC13.19□□□□□ -0.3
HIST1H3AP68431 FP236241.2-201ENST00000624906 1185 ntBASIC13.19□□□□□ -0.3
HIST1H3AP68431 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.19□□□□□ -0.3
HIST1H3AP68431 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 AC055811.4-201ENST00000624039 1754 ntBASIC13.19□□□□□ -0.3
HIST1H3AP68431 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H3AP68431 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H3AP68431 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 AC023908.3-201ENST00000564211 3047 ntBASIC13.18□□□□□ -0.3
HIST1H3AP68431 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H3AP68431 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H3AP68431 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms