Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.49□□□□□ -0.09
VSX2P58304 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.49□□□□□ -0.09
VSX2P58304 AP000812.2-201ENST00000538934 718 ntBASIC14.49□□□□□ -0.09
VSX2P58304 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.49□□□□□ -0.09
VSX2P58304 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 AC138951.2-201ENST00000623455 1161 ntBASIC14.49□□□□□ -0.09
VSX2P58304 AC132938.4-201ENST00000623835 848 ntBASIC14.49□□□□□ -0.09
VSX2P58304 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 MYO15B-237ENST00000642007 4893 ntBASIC14.49□□□□□ -0.09
VSX2P58304 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.49□□□□□ -0.09
VSX2P58304 REXO1L2P-201ENST00000425429 2069 ntBASIC14.49□□□□□ -0.09
VSX2P58304 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
VSX2P58304 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
VSX2P58304 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.49□□□□□ -0.09
VSX2P58304 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VSX2P58304 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.48□□□□□ -0.09
VSX2P58304 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.48□□□□□ -0.09
VSX2P58304 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.48□□□□□ -0.09
VSX2P58304 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VSX2P58304 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VSX2P58304 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 TPM3P8-201ENST00000330554 643 ntBASIC14.48□□□□□ -0.09
VSX2P58304 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.48□□□□□ -0.09
VSX2P58304 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.48□□□□□ -0.09
VSX2P58304 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.48□□□□□ -0.09
VSX2P58304 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.48□□□□□ -0.09
VSX2P58304 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VSX2P58304 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.48□□□□□ -0.09
VSX2P58304 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.48□□□□□ -0.09
VSX2P58304 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.48□□□□□ -0.09
VSX2P58304 ECM1P1-201ENST00000604092 1279 ntBASIC14.48□□□□□ -0.09
VSX2P58304 RHOXF1P1-202ENST00000635473 501 ntBASIC14.48□□□□□ -0.09
VSX2P58304 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VSX2P58304 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.48□□□□□ -0.09
VSX2P58304 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.48□□□□□ -0.09
VSX2P58304 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VSX2P58304 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.47□□□□□ -0.09
VSX2P58304 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.47□□□□□ -0.09
VSX2P58304 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VSX2P58304 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VSX2P58304 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms