Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL451000.1-201ENST00000451300 1186 ntBASIC16.75■□□□□ 0.27
TM4SF4P48230 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.75■□□□□ 0.27
TM4SF4P48230 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.75■□□□□ 0.27
TM4SF4P48230 SCARNA12-201ENST00000459155 270 ntBASIC16.75■□□□□ 0.27
TM4SF4P48230 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.75■□□□□ 0.27
TM4SF4P48230 AC023906.1-201ENST00000486386 453 ntBASIC16.75■□□□□ 0.27
TM4SF4P48230 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 AC090136.2-201ENST00000517809 420 ntBASIC16.75■□□□□ 0.27
TM4SF4P48230 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.75■□□□□ 0.27
TM4SF4P48230 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.75■□□□□ 0.27
TM4SF4P48230 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.75■□□□□ 0.27
TM4SF4P48230 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 NAV1-210ENST00000593583 726 ntBASIC16.75■□□□□ 0.27
TM4SF4P48230 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.75■□□□□ 0.27
TM4SF4P48230 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 AL662844.4-201ENST00000606367 2838 ntBASIC16.75■□□□□ 0.27
TM4SF4P48230 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 FUCA1P1-201ENST00000374476 1351 ntBASIC16.75■□□□□ 0.27
TM4SF4P48230 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TM4SF4P48230 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.75■□□□□ 0.27
TM4SF4P48230 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM4SF4P48230 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TM4SF4P48230 PCDHB19P-201ENST00000570871 2371 ntBASIC16.74■□□□□ 0.27
TM4SF4P48230 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.74■□□□□ 0.27
TM4SF4P48230 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TM4SF4P48230 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.74■□□□□ 0.27
TM4SF4P48230 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.74■□□□□ 0.27
TM4SF4P48230 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF4P48230 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TM4SF4P48230 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF4P48230 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.74■□□□□ 0.27
TM4SF4P48230 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF4P48230 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 AF274858.1-201ENST00000406288 372 ntBASIC16.74■□□□□ 0.27
TM4SF4P48230 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 OR8T1P-201ENST00000421347 918 ntBASIC16.74■□□□□ 0.27
TM4SF4P48230 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TM4SF4P48230 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.74■□□□□ 0.27
TM4SF4P48230 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TM4SF4P48230 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.74■□□□□ 0.27
TM4SF4P48230 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.74■□□□□ 0.27
TM4SF4P48230 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC16.74■□□□□ 0.27
TM4SF4P48230 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.74■□□□□ 0.27
TM4SF4P48230 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.74■□□□□ 0.27
TM4SF4P48230 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TM4SF4P48230 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.74■□□□□ 0.27
TM4SF4P48230 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.74■□□□□ 0.27
TM4SF4P48230 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF4P48230 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.74■□□□□ 0.27
TM4SF4P48230 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF4P48230 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TM4SF4P48230 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF4P48230 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.74■□□□□ 0.27
TM4SF4P48230 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.74■□□□□ 0.27
TM4SF4P48230 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM4SF4P48230 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TM4SF4P48230 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.73■□□□□ 0.27
TM4SF4P48230 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.73■□□□□ 0.27
TM4SF4P48230 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.73■□□□□ 0.27
TM4SF4P48230 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TM4SF4P48230 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.73■□□□□ 0.27
TM4SF4P48230 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC16.73■□□□□ 0.27
TM4SF4P48230 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.73■□□□□ 0.27
TM4SF4P48230 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.73■□□□□ 0.27
TM4SF4P48230 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TM4SF4P48230 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.73■□□□□ 0.27
TM4SF4P48230 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM4SF4P48230 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms