Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
GRIA1P42261 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.29■□□□□ 0.04
GRIA1P42261 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.29■□□□□ 0.04
GRIA1P42261 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.29■□□□□ 0.04
GRIA1P42261 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.29■□□□□ 0.04
GRIA1P42261 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GRIA1P42261 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 API5-211ENST00000534695 560 ntTSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.29■□□□□ 0.04
GRIA1P42261 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
GRIA1P42261 CTBP2P3-201ENST00000585629 1255 ntBASIC15.29■□□□□ 0.04
GRIA1P42261 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.29■□□□□ 0.04
GRIA1P42261 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 AJ011932.1-201ENST00000621707 465 ntBASIC15.29■□□□□ 0.04
GRIA1P42261 AC005252.2-201ENST00000624630 1141 ntBASIC15.29■□□□□ 0.04
GRIA1P42261 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GRIA1P42261 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.29■□□□□ 0.04
GRIA1P42261 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GRIA1P42261 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIA1P42261 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GRIA1P42261 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 KLF2P2-201ENST00000416807 1039 ntBASIC15.28■□□□□ 0.04
GRIA1P42261 NUS1P3-201ENST00000423502 862 ntBASIC15.28■□□□□ 0.04
GRIA1P42261 EIF3FP3-201ENST00000434851 1086 ntBASIC15.28■□□□□ 0.04
GRIA1P42261 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.28■□□□□ 0.04
GRIA1P42261 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 MYCLP2-201ENST00000449268 967 ntBASIC15.28■□□□□ 0.04
GRIA1P42261 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 ELK1P1-201ENST00000485699 580 ntBASIC15.28■□□□□ 0.04
GRIA1P42261 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 RN7SL204P-201ENST00000582831 262 ntBASIC15.28■□□□□ 0.04
GRIA1P42261 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIA1P42261 LINC02560-201ENST00000596379 459 ntBASIC15.28■□□□□ 0.04
GRIA1P42261 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIA1P42261 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GRIA1P42261 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GRIA1P42261 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
GRIA1P42261 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
GRIA1P42261 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms