Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 DUX4L50-201ENST00000455245 715 ntBASIC14.66□□□□□ -0.06
HOXA6P31267 AC010234.1-201ENST00000494599 870 ntBASIC14.66□□□□□ -0.06
HOXA6P31267 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.66□□□□□ -0.06
HOXA6P31267 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXA6P31267 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.66□□□□□ -0.06
HOXA6P31267 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.66□□□□□ -0.06
HOXA6P31267 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXA6P31267 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXA6P31267 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HOXA6P31267 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.66□□□□□ -0.06
HOXA6P31267 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HOXA6P31267 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.66□□□□□ -0.06
HOXA6P31267 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HOXA6P31267 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.66□□□□□ -0.06
HOXA6P31267 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HOXA6P31267 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
HOXA6P31267 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXA6P31267 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXA6P31267 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXA6P31267 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXA6P31267 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HOXA6P31267 AL357563.1-201ENST00000404728 395 ntBASIC14.65□□□□□ -0.06
HOXA6P31267 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.65□□□□□ -0.06
HOXA6P31267 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 RN7SL530P-201ENST00000485097 298 ntBASIC14.65□□□□□ -0.06
HOXA6P31267 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.65□□□□□ -0.06
HOXA6P31267 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.65□□□□□ -0.06
HOXA6P31267 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.65□□□□□ -0.06
HOXA6P31267 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.65□□□□□ -0.06
HOXA6P31267 AC138466.4-201ENST00000623965 852 ntBASIC14.65□□□□□ -0.06
HOXA6P31267 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HOXA6P31267 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.65□□□□□ -0.06
HOXA6P31267 AC023090.2-201ENST00000625182 2110 ntBASIC14.65□□□□□ -0.06
HOXA6P31267 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HOXA6P31267 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.65□□□□□ -0.07
HOXA6P31267 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HOXA6P31267 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 AC007292.2-201ENST00000593524 1812 ntBASIC14.64□□□□□ -0.07
HOXA6P31267 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HOXA6P31267 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.64□□□□□ -0.07
HOXA6P31267 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXA6P31267 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXA6P31267 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.64□□□□□ -0.07
HOXA6P31267 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.64□□□□□ -0.07
HOXA6P31267 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXA6P31267 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXA6P31267 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.64□□□□□ -0.07
HOXA6P31267 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
HOXA6P31267 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.64□□□□□ -0.07
HOXA6P31267 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 CYP2T1P-202ENST00000641596 2535 ntBASIC14.64□□□□□ -0.07
HOXA6P31267 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HOXA6P31267 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.64□□□□□ -0.07
HOXA6P31267 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HOXA6P31267 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HOXA6P31267 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms