Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AGGF1P2-201ENST00000426656 2106 ntBASIC14.91□□□□□ -0.02
PDGFBP01127 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDGFBP01127 SERBP1P2-201ENST00000436888 1164 ntBASIC14.91□□□□□ -0.02
PDGFBP01127 BRI3P1-201ENST00000440440 378 ntBASIC14.91□□□□□ -0.02
PDGFBP01127 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 ABHD17AP9-201ENST00000561925 548 ntBASIC14.91□□□□□ -0.02
PDGFBP01127 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDGFBP01127 AC006548.2-201ENST00000605217 529 ntBASIC14.91□□□□□ -0.02
PDGFBP01127 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.91□□□□□ -0.02
PDGFBP01127 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PDGFBP01127 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDGFBP01127 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFBP01127 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
PDGFBP01127 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDGFBP01127 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PDGFBP01127 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.91□□□□□ -0.02
PDGFBP01127 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PDGFBP01127 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDGFBP01127 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFBP01127 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFBP01127 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
PDGFBP01127 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
PDGFBP01127 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PDGFBP01127 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
PDGFBP01127 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
PDGFBP01127 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 MIR566-201ENST00000385187 94 ntBASIC14.9□□□□□ -0.02
PDGFBP01127 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFBP01127 RN7SL494P-201ENST00000461517 304 ntBASIC14.9□□□□□ -0.02
PDGFBP01127 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.9□□□□□ -0.02
PDGFBP01127 AC138701.2-201ENST00000553634 226 ntBASIC14.9□□□□□ -0.02
PDGFBP01127 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFBP01127 AC002044.2-201ENST00000624910 970 ntBASIC14.9□□□□□ -0.02
PDGFBP01127 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PDGFBP01127 AC021305.1-201ENST00000520656 1514 ntBASIC14.9□□□□□ -0.02
PDGFBP01127 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
PDGFBP01127 LINC02447-202ENST00000501888 2146 ntBASIC14.9□□□□□ -0.02
PDGFBP01127 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PDGFBP01127 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFBP01127 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PDGFBP01127 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
PDGFBP01127 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 AC003102.2-201ENST00000589195 1469 ntBASIC14.89□□□□□ -0.03
PDGFBP01127 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PDGFBP01127 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFBP01127 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.89□□□□□ -0.03
PDGFBP01127 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PDGFBP01127 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PDGFBP01127 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.89□□□□□ -0.03
PDGFBP01127 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.89□□□□□ -0.03
PDGFBP01127 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.89□□□□□ -0.03
PDGFBP01127 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.89□□□□□ -0.03
PDGFBP01127 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.89□□□□□ -0.03
PDGFBP01127 TREHP1-201ENST00000531328 465 ntBASIC14.89□□□□□ -0.03
PDGFBP01127 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms